OmniBioAI

Phasing & Haplotype Analysis

Upload a VCF, paste a path, or choose an existing OmniObject (VCF-only).

Category: Genomics Inputs: VCF/BCF Modes: cohort / reference / trio / read-backed

All Plugins

Choose input method

Upload VCF/BCF Paste VCF path Select OmniObject (registry)

Upload (.vcf / .vcf.gz / .bcf)

Saved under data/uploads/phasing_haplotype_analysis/.

Paste VCF/BCF path

Must exist on disk and be readable by the server.

Select VCF from work/object_registry.json

Only VCF/VCF.GZ/BCF entries are shown.

Mode

Engine

MAF

Missingness

PED/FAM (trio mode)

Genetic map

Reference panel path (reference mode)

BAM/CRAM (read-backed mode)

SNPs only (recommended) Merge per-chrom outputs (later)