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Gene Annotation
Paste a gene list, upload a file, or select an OmniObject, then generate an annotation table with links to public resources and a downloadable TSV.
Ready
MVP
Inputs
Choose source + provide genes
Input source
Paste genes
Upload file
OmniObject
Paste gene symbols
Tip: one per line, or space/comma separated.
Upload gene list (.txt/.csv/.tsv)
If header contains
gene
/
genes
/
symbol
, that column is used; otherwise the first column.
Select OmniObject
(0 available)
-- Select --
No objects returned. Ensure you're reading the same registry (default:
work/object_registry.json
).
Options
Annotation types + output
Annotation types
GO terms
Map genes to GO IDs (OntologyService).
Pathways
Map genes to KEGG IDs (OntologyService).
Clinical evidence
Show clinical evidence tabs (enabled sources in clinical_evidence_service) with links.
LLM interpretation
Add a column with LLM notes
Uses local Ollama via LLMService (one call per run).
Annotate genes
Download TSV
Note: Gene symbol links go to NCBI Gene search. Table supports search/sort/paging.